Summary
I. Introduction: B cells, Antibodies and Antigens
the puzzle of low HIV spike density
II. Affinity Maturation: Evolution in the Germinal Center
III. Fitness & Evolution: Competition for virus capture
dependence of potency on spike density
IV. Optimal density for synthetic nanoparticle vaccination; increased competition in HIV
A. Amitai, A.K. Chakraborty, M. Kardar PLOS Comp. Bio. doi.org/10.1371/journal.pcbi.1006408
V. Broadly neutralizing Antibodies: Controlling affinity maturation against a mutable virus
vs.
VI. Affinity Maturation with Multiple Antigens
Johannes Gutenberg University Mainz Physics Colloquium April 21, 2021
Assaf Amitai Shenshen Wang Arup K. Chakraborty
Hanrong Chen John Barton Scott Shaffer Penny Moore